Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NKAPP1-205ENST00000585790 367 ntBASIC24.05■■□□□ 1.44
LTN1O94822 AL356488.2-201ENST00000602755 427 ntBASIC24.05■■□□□ 1.44
LTN1O94822 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
LTN1O94822 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
LTN1O94822 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
LTN1O94822 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC24.05■■□□□ 1.44
LTN1O94822 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LTN1O94822 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
LTN1O94822 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
LTN1O94822 KLF4P1-201ENST00000412782 1185 ntBASIC24.04■■□□□ 1.44
LTN1O94822 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.04■■□□□ 1.44
LTN1O94822 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC24.04■■□□□ 1.44
LTN1O94822 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.04■■□□□ 1.44
LTN1O94822 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
LTN1O94822 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 GMCL1P1-201ENST00000463439 1581 ntBASIC24.04■■□□□ 1.44
LTN1O94822 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
LTN1O94822 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LTN1O94822 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC24.04■■□□□ 1.44
LTN1O94822 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 YBX2P1-201ENST00000394192 760 ntBASIC24.03■■□□□ 1.44
LTN1O94822 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC24.03■■□□□ 1.44
LTN1O94822 AC096633.1-201ENST00000422446 749 ntBASIC24.03■■□□□ 1.44
LTN1O94822 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.03■■□□□ 1.44
LTN1O94822 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC24.03■■□□□ 1.44
LTN1O94822 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.03■■□□□ 1.44
LTN1O94822 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.03■■□□□ 1.44
LTN1O94822 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC24.03■■□□□ 1.44
LTN1O94822 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC24.03■■□□□ 1.44
LTN1O94822 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC24.03■■□□□ 1.44
LTN1O94822 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.03■■□□□ 1.44
LTN1O94822 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 AC027601.4-201ENST00000611259 610 ntBASIC24.03■■□□□ 1.44
LTN1O94822 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LTN1O94822 SIGLEC16-201ENST00000599858 1437 ntBASIC24.02■■□□□ 1.44
LTN1O94822 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.02■■□□□ 1.44
LTN1O94822 AC148477.5-201ENST00000625164 1645 ntBASIC24.02■■□□□ 1.44
LTN1O94822 LAGE3P1-201ENST00000425356 484 ntBASIC24.02■■□□□ 1.44
LTN1O94822 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC24.02■■□□□ 1.44
LTN1O94822 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC24.02■■□□□ 1.44
LTN1O94822 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC24.02■■□□□ 1.44
LTN1O94822 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC24.02■■□□□ 1.44
LTN1O94822 AC055717.3-201ENST00000622967 595 ntBASIC24.02■■□□□ 1.44
LTN1O94822 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LTN1O94822 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
LTN1O94822 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LTN1O94822 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC24.02■■□□□ 1.44
LTN1O94822 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.02■■□□□ 1.44
LTN1O94822 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
LTN1O94822 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
LTN1O94822 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC24.02■■□□□ 1.44
LTN1O94822 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
LTN1O94822 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LTN1O94822 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LTN1O94822 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
LTN1O94822 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
LTN1O94822 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC24.01■■□□□ 1.43
LTN1O94822 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC24.01■■□□□ 1.43
LTN1O94822 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.01■■□□□ 1.43
LTN1O94822 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.01■■□□□ 1.43
LTN1O94822 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
LTN1O94822 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.01■■□□□ 1.43
LTN1O94822 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LTN1O94822 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.01■■□□□ 1.43
LTN1O94822 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.01■■□□□ 1.43
LTN1O94822 CAND2-206ENST00000626378 333 ntTSL 5 BASIC24.01■■□□□ 1.43
LTN1O94822 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LTN1O94822 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC24■■□□□ 1.43
LTN1O94822 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC24■■□□□ 1.43
LTN1O94822 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC24■■□□□ 1.43
LTN1O94822 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
LTN1O94822 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LTN1O94822 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC24■■□□□ 1.43
LTN1O94822 AC073621.1-201ENST00000392730 636 ntBASIC24■■□□□ 1.43
LTN1O94822 CENPM-204ENST00000402420 688 ntTSL 5 BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms