Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 HOXB1-202ENST00000577092 1414 ntBASIC17.6■□□□□ 0.41
SEC22BO75396 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.6■□□□□ 0.41
SEC22BO75396 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.6■□□□□ 0.41
SEC22BO75396 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.6■□□□□ 0.41
SEC22BO75396 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SEC22BO75396 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
SEC22BO75396 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 KRT8P7-201ENST00000533003 1432 ntBASIC17.59■□□□□ 0.41
SEC22BO75396 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 CCR12P-201ENST00000446203 998 ntBASIC17.59■□□□□ 0.41
SEC22BO75396 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 MIR4785-201ENST00000585005 73 ntBASIC17.59■□□□□ 0.41
SEC22BO75396 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.59■□□□□ 0.41
SEC22BO75396 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 CR769767.2-201ENST00000622735 460 ntBASIC17.59■□□□□ 0.41
SEC22BO75396 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.59■□□□□ 0.41
SEC22BO75396 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SEC22BO75396 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.59■□□□□ 0.41
SEC22BO75396 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SEC22BO75396 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEC22BO75396 GNAS-203ENST00000306120 1878 ntBASIC17.58■□□□□ 0.41
SEC22BO75396 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEC22BO75396 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEC22BO75396 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SEC22BO75396 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.58■□□□□ 0.41
SEC22BO75396 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SEC22BO75396 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SEC22BO75396 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.58■□□□□ 0.41
SEC22BO75396 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
SEC22BO75396 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.58■□□□□ 0.41
SEC22BO75396 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
SEC22BO75396 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.58■□□□□ 0.4
SEC22BO75396 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 BX088651.1-201ENST00000540551 451 ntBASIC17.58■□□□□ 0.4
SEC22BO75396 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SEC22BO75396 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.58■□□□□ 0.4
SEC22BO75396 AP000525.1-201ENST00000608286 694 ntBASIC17.58■□□□□ 0.4
SEC22BO75396 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SEC22BO75396 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.58■□□□□ 0.4
SEC22BO75396 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.58■□□□□ 0.4
SEC22BO75396 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SEC22BO75396 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.57■□□□□ 0.4
SEC22BO75396 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.57■□□□□ 0.4
SEC22BO75396 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SEC22BO75396 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SEC22BO75396 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SEC22BO75396 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SEC22BO75396 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SEC22BO75396 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SEC22BO75396 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SEC22BO75396 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SEC22BO75396 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms