Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
PLOD3O60568 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.19■□□□□ 0.34
PLOD3O60568 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.19■□□□□ 0.34
PLOD3O60568 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.19■□□□□ 0.34
PLOD3O60568 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PLOD3O60568 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
PLOD3O60568 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.19■□□□□ 0.34
PLOD3O60568 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PLOD3O60568 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.18■□□□□ 0.34
PLOD3O60568 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.18■□□□□ 0.34
PLOD3O60568 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 LIN28AP1-201ENST00000429574 405 ntBASIC17.18■□□□□ 0.34
PLOD3O60568 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.18■□□□□ 0.34
PLOD3O60568 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 AC010203.1-204ENST00000548782 407 ntBASIC17.18■□□□□ 0.34
PLOD3O60568 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.18■□□□□ 0.34
PLOD3O60568 AC024243.1-201ENST00000609234 778 ntBASIC17.18■□□□□ 0.34
PLOD3O60568 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.18■□□□□ 0.34
PLOD3O60568 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.18■□□□□ 0.34
PLOD3O60568 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 AL133373.2-201ENST00000623187 2828 ntBASIC17.18■□□□□ 0.34
PLOD3O60568 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
PLOD3O60568 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PLOD3O60568 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.18■□□□□ 0.34
PLOD3O60568 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PLOD3O60568 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
PLOD3O60568 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.17■□□□□ 0.34
PLOD3O60568 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PLOD3O60568 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.17■□□□□ 0.34
PLOD3O60568 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.17■□□□□ 0.34
PLOD3O60568 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 LINC01023-201ENST00000606054 436 ntBASIC17.17■□□□□ 0.34
PLOD3O60568 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 AC092865.7-201ENST00000641832 219 ntBASIC17.17■□□□□ 0.34
PLOD3O60568 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 AC020916.1-201ENST00000587762 1774 ntBASIC17.17■□□□□ 0.34
PLOD3O60568 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PLOD3O60568 AP000997.3-201ENST00000623333 2250 ntBASIC17.17■□□□□ 0.34
PLOD3O60568 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.17■□□□□ 0.34
PLOD3O60568 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.17■□□□□ 0.34
PLOD3O60568 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PLOD3O60568 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PLOD3O60568 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms