Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PHGDHO43175 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PHGDHO43175 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 AC092338.2-201ENST00000568827 1415 ntBASIC18.15■□□□□ 0.5
PHGDHO43175 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PHGDHO43175 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.15■□□□□ 0.5
PHGDHO43175 TSPY17P-201ENST00000450329 467 ntBASIC18.15■□□□□ 0.5
PHGDHO43175 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.15■□□□□ 0.5
PHGDHO43175 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PHGDHO43175 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.15■□□□□ 0.5
PHGDHO43175 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.15■□□□□ 0.5
PHGDHO43175 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.15■□□□□ 0.5
PHGDHO43175 MIR4785-201ENST00000585005 73 ntBASIC18.15■□□□□ 0.5
PHGDHO43175 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PHGDHO43175 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PHGDHO43175 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.15■□□□□ 0.5
PHGDHO43175 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PHGDHO43175 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PHGDHO43175 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
PHGDHO43175 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PHGDHO43175 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.14■□□□□ 0.5
PHGDHO43175 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.14■□□□□ 0.5
PHGDHO43175 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.14■□□□□ 0.5
PHGDHO43175 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.14■□□□□ 0.49
PHGDHO43175 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PHGDHO43175 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
PHGDHO43175 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 MIR718-201ENST00000390190 70 ntBASIC18.14■□□□□ 0.49
PHGDHO43175 MIR1238-201ENST00000408483 83 ntBASIC18.14■□□□□ 0.49
PHGDHO43175 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.14■□□□□ 0.49
PHGDHO43175 SLC25A6P5-201ENST00000435663 894 ntBASIC18.14■□□□□ 0.49
PHGDHO43175 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.14■□□□□ 0.49
PHGDHO43175 FITM1-202ENST00000559294 800 ntBASIC18.14■□□□□ 0.49
PHGDHO43175 WWOX-216ENST00000569818 525 ntBASIC18.14■□□□□ 0.49
PHGDHO43175 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PHGDHO43175 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.14■□□□□ 0.49
PHGDHO43175 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
PHGDHO43175 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.14■□□□□ 0.49
PHGDHO43175 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.14■□□□□ 0.49
PHGDHO43175 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.14■□□□□ 0.49
PHGDHO43175 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.14■□□□□ 0.49
PHGDHO43175 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PHGDHO43175 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PHGDHO43175 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PHGDHO43175 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.13■□□□□ 0.49
PHGDHO43175 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PHGDHO43175 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms