Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.07■□□□□ 0.64
TRANK1O15050 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.07■□□□□ 0.64
TRANK1O15050 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.07■□□□□ 0.64
TRANK1O15050 AP000344.2-201ENST00000512987 629 ntBASIC19.07■□□□□ 0.64
TRANK1O15050 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRANK1O15050 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRANK1O15050 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.07■□□□□ 0.64
TRANK1O15050 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRANK1O15050 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.07■□□□□ 0.64
TRANK1O15050 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRANK1O15050 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TRANK1O15050 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.06■□□□□ 0.64
TRANK1O15050 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRANK1O15050 AC108073.2-201ENST00000464002 357 ntBASIC19.06■□□□□ 0.64
TRANK1O15050 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.06■□□□□ 0.64
TRANK1O15050 Z92544.3-201ENST00000624747 417 ntBASIC19.06■□□□□ 0.64
TRANK1O15050 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRANK1O15050 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TRANK1O15050 AC007952.6-201ENST00000573168 2673 ntBASIC19.06■□□□□ 0.64
TRANK1O15050 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRANK1O15050 AC003957.1-201ENST00000625108 2673 ntBASIC19.06■□□□□ 0.64
TRANK1O15050 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 TSEN15P1-201ENST00000423257 515 ntBASIC19.05■□□□□ 0.64
TRANK1O15050 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.05■□□□□ 0.64
TRANK1O15050 AC190387.1-201ENST00000551683 408 ntBASIC19.05■□□□□ 0.64
TRANK1O15050 AL031432.2-201ENST00000566714 459 ntBASIC19.05■□□□□ 0.64
TRANK1O15050 AL928711.1-201ENST00000570165 459 ntBASIC19.05■□□□□ 0.64
TRANK1O15050 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.05■□□□□ 0.64
TRANK1O15050 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRANK1O15050 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRANK1O15050 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.05■□□□□ 0.64
TRANK1O15050 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.05■□□□□ 0.64
TRANK1O15050 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.05■□□□□ 0.64
TRANK1O15050 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.05■□□□□ 0.64
TRANK1O15050 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRANK1O15050 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.05■□□□□ 0.64
TRANK1O15050 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRANK1O15050 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRANK1O15050 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRANK1O15050 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRANK1O15050 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.04■□□□□ 0.64
TRANK1O15050 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.04■□□□□ 0.64
TRANK1O15050 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.04■□□□□ 0.64
TRANK1O15050 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.04■□□□□ 0.64
TRANK1O15050 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.04■□□□□ 0.64
TRANK1O15050 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 PRSS29P-201ENST00000440800 595 ntBASIC19.04■□□□□ 0.64
TRANK1O15050 AC005498.2-205ENST00000593218 784 ntBASIC19.04■□□□□ 0.64
TRANK1O15050 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.04■□□□□ 0.64
TRANK1O15050 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRANK1O15050 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 MTCL1P1-201ENST00000446207 792 ntBASIC19.04■□□□□ 0.64
TRANK1O15050 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.04■□□□□ 0.64
TRANK1O15050 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.04■□□□□ 0.64
TRANK1O15050 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.04■□□□□ 0.64
TRANK1O15050 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRANK1O15050 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.04■□□□□ 0.64
TRANK1O15050 AP000867.4-201ENST00000641616 219 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms