Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TLR4O00206 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.04■□□□□ 0.48
TLR4O00206 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TLR4O00206 MIR149-201ENST00000384879 89 ntBASIC18.04■□□□□ 0.48
TLR4O00206 NUS1P2-201ENST00000417358 873 ntBASIC18.04■□□□□ 0.48
TLR4O00206 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.04■□□□□ 0.48
TLR4O00206 AC106795.1-205ENST00000512851 1056 ntBASIC18.04■□□□□ 0.48
TLR4O00206 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.04■□□□□ 0.48
TLR4O00206 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.04■□□□□ 0.48
TLR4O00206 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.04■□□□□ 0.48
TLR4O00206 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TLR4O00206 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
TLR4O00206 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 POM121L3P-201ENST00000419331 1163 ntBASIC18.03■□□□□ 0.48
TLR4O00206 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
TLR4O00206 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.03■□□□□ 0.48
TLR4O00206 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
TLR4O00206 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.03■□□□□ 0.48
TLR4O00206 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 SLC25A6P4-201ENST00000586535 553 ntBASIC18.03■□□□□ 0.48
TLR4O00206 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 AC008687.5-201ENST00000593746 558 ntBASIC18.03■□□□□ 0.48
TLR4O00206 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.03■□□□□ 0.48
TLR4O00206 AC083906.6-201ENST00000641366 219 ntBASIC18.03■□□□□ 0.48
TLR4O00206 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.03■□□□□ 0.48
TLR4O00206 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.03■□□□□ 0.48
TLR4O00206 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.03■□□□□ 0.48
TLR4O00206 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TLR4O00206 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.03■□□□□ 0.48
TLR4O00206 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TLR4O00206 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TLR4O00206 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.02■□□□□ 0.48
TLR4O00206 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.02■□□□□ 0.48
TLR4O00206 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.02■□□□□ 0.48
TLR4O00206 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.02■□□□□ 0.48
TLR4O00206 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TLR4O00206 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TLR4O00206 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TLR4O00206 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TLR4O00206 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TLR4O00206 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
TLR4O00206 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
TLR4O00206 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
TLR4O00206 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TLR4O00206 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TLR4O00206 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TLR4O00206 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TLR4O00206 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TLR4O00206 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TLR4O00206 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TLR4O00206 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TLR4O00206 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TLR4O00206 AL161938.1-201ENST00000569833 2180 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms