Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00473A8K010 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00473A8K010 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00473A8K010 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
LINC00473A8K010 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00473A8K010 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00473A8K010 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00473A8K010 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00473A8K010 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00473A8K010 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00473A8K010 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.85□□□□□ -0.03
LINC00473A8K010 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 AC112497.1-201ENST00000624824 639 ntBASIC14.85□□□□□ -0.03
LINC00473A8K010 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00473A8K010 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00473A8K010 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC00473A8K010 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00473A8K010 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00473A8K010 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00473A8K010 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 MIR1238-201ENST00000408483 83 ntBASIC14.84□□□□□ -0.03
LINC00473A8K010 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00473A8K010 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AC104390.1-201ENST00000555663 520 ntBASIC14.84□□□□□ -0.03
LINC00473A8K010 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LINC00473A8K010 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
LINC00473A8K010 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 AC116562.4-202ENST00000641738 218 ntBASIC14.84□□□□□ -0.03
LINC00473A8K010 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
LINC00473A8K010 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00473A8K010 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00473A8K010 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00473A8K010 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC00473A8K010 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00473A8K010 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00473A8K010 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC00473A8K010 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00473A8K010 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00473A8K010 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.83□□□□□ -0.03
LINC00473A8K010 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LINC00473A8K010 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LINC00473A8K010 AL024508.2-201ENST00000607749 1894 ntBASIC14.83□□□□□ -0.04
LINC00473A8K010 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
LINC00473A8K010 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.83□□□□□ -0.04
LINC00473A8K010 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00473A8K010 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00473A8K010 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.83□□□□□ -0.04
LINC00473A8K010 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms