Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 AC011467.2-201ENST00000598425 242 ntBASIC26.84■■□□□ 1.89
HFM1A2PYH4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
HFM1A2PYH4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC26.84■■□□□ 1.89
HFM1A2PYH4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 RN7SL510P-201ENST00000581311 263 ntBASIC26.83■■□□□ 1.89
HFM1A2PYH4 AL121772.3-201ENST00000610840 674 ntBASIC26.83■■□□□ 1.89
HFM1A2PYH4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC26.83■■□□□ 1.89
HFM1A2PYH4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
HFM1A2PYH4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.88
HFM1A2PYH4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC26.83■■□□□ 1.88
HFM1A2PYH4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
HFM1A2PYH4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC26.82■■□□□ 1.88
HFM1A2PYH4 REXO1L6P-202ENST00000619970 1078 ntBASIC26.82■■□□□ 1.88
HFM1A2PYH4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MINOS1P3-201ENST00000457048 203 ntBASIC26.81■■□□□ 1.88
HFM1A2PYH4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.81■■□□□ 1.88
HFM1A2PYH4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC26.81■■□□□ 1.88
HFM1A2PYH4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 BMF-207ENST00000559701 630 ntTSL 3 BASIC26.8■■□□□ 1.88
HFM1A2PYH4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
HFM1A2PYH4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms