Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 AL163051.1-201ENST00000569214 1512 ntBASIC16.67■□□□□ 0.26
ZC3H12DA2A288 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 AC211429.1-201ENST00000415277 523 ntBASIC16.67■□□□□ 0.26
ZC3H12DA2A288 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.67■□□□□ 0.26
ZC3H12DA2A288 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 KRT8P7-201ENST00000533003 1432 ntBASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 AC093677.2-201ENST00000600169 1863 ntBASIC16.66■□□□□ 0.26
ZC3H12DA2A288 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 AC024243.1-201ENST00000609234 778 ntBASIC16.66■□□□□ 0.26
ZC3H12DA2A288 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 AL138966.2-201ENST00000621997 464 ntBASIC16.66■□□□□ 0.26
ZC3H12DA2A288 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZC3H12DA2A288 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.65■□□□□ 0.26
ZC3H12DA2A288 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.65■□□□□ 0.26
ZC3H12DA2A288 AL512604.3-201ENST00000569583 964 ntBASIC16.65■□□□□ 0.26
ZC3H12DA2A288 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms