Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.76■□□□□ 0.91
SYCE3A1L190 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.76■□□□□ 0.91
SYCE3A1L190 UNC93B4-201ENST00000505679 747 ntBASIC20.76■□□□□ 0.91
SYCE3A1L190 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SYCE3A1L190 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 IKBKGP1-201ENST00000612193 1073 ntBASIC20.76■□□□□ 0.91
SYCE3A1L190 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.76■□□□□ 0.91
SYCE3A1L190 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SYCE3A1L190 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.75■□□□□ 0.91
SYCE3A1L190 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 TSPY6P-201ENST00000448518 926 ntBASIC20.75■□□□□ 0.91
SYCE3A1L190 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
SYCE3A1L190 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.75■□□□□ 0.91
SYCE3A1L190 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.75■□□□□ 0.91
SYCE3A1L190 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.75■□□□□ 0.91
SYCE3A1L190 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.75■□□□□ 0.91
SYCE3A1L190 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SYCE3A1L190 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.75■□□□□ 0.91
SYCE3A1L190 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SYCE3A1L190 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SYCE3A1L190 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
SYCE3A1L190 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.74■□□□□ 0.91
SYCE3A1L190 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.74■□□□□ 0.91
SYCE3A1L190 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
SYCE3A1L190 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.74■□□□□ 0.91
SYCE3A1L190 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.74■□□□□ 0.91
SYCE3A1L190 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYCE3A1L190 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.74■□□□□ 0.91
SYCE3A1L190 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SYCE3A1L190 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.73■□□□□ 0.91
SYCE3A1L190 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
SYCE3A1L190 AP000593.1-201ENST00000393668 712 ntBASIC20.73■□□□□ 0.91
SYCE3A1L190 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 AC006970.2-201ENST00000450065 779 ntBASIC20.73■□□□□ 0.91
SYCE3A1L190 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.73■□□□□ 0.91
SYCE3A1L190 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.73■□□□□ 0.91
SYCE3A1L190 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.73■□□□□ 0.91
SYCE3A1L190 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.73■□□□□ 0.91
SYCE3A1L190 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.73■□□□□ 0.91
SYCE3A1L190 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 CROCCP2-202ENST00000412962 2773 ntBASIC20.73■□□□□ 0.91
SYCE3A1L190 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
SYCE3A1L190 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYCE3A1L190 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SYCE3A1L190 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SYCE3A1L190 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYCE3A1L190 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms