Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 C8orf49-201ENST00000525043 1968 ntBASIC18.27■□□□□ 0.52
CCDC189A1A4V9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC189A1A4V9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC189A1A4V9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC189A1A4V9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC189A1A4V9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC189A1A4V9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC189A1A4V9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 PCDH8P1-201ENST00000428983 2773 ntBASIC18.25■□□□□ 0.51
CCDC189A1A4V9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 AL118508.1-201ENST00000613502 2345 ntBASIC18.25■□□□□ 0.51
CCDC189A1A4V9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 MCCD1P1-208ENST00000445732 328 ntBASIC18.25■□□□□ 0.51
CCDC189A1A4V9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 AC233702.5-201ENST00000584107 538 ntBASIC18.25■□□□□ 0.51
CCDC189A1A4V9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC189A1A4V9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 AL662844.4-201ENST00000606367 2838 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 AC034236.2-201ENST00000606662 1610 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 ABHD17AP1-201ENST00000358206 933 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 RPS2P55-201ENST00000397318 883 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 SLC25A6P5-201ENST00000435663 894 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 MFAP1P1-201ENST00000442257 1255 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 AC107956.1-201ENST00000494359 873 ntBASIC18.24■□□□□ 0.51
CCDC189A1A4V9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC189A1A4V9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms