Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 AL138688.1-201ENST00000624851 1594 ntBASIC15.9■□□□□ 0.14
SHISA3A0PJX4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 PCDHB19P-201ENST00000570871 2371 ntBASIC15.9■□□□□ 0.14
SHISA3A0PJX4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SHISA3A0PJX4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 AC008040.2-201ENST00000461049 708 ntBASIC15.89■□□□□ 0.13
SHISA3A0PJX4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 CKBP1-201ENST00000565489 1086 ntBASIC15.89■□□□□ 0.13
SHISA3A0PJX4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SHISA3A0PJX4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 AC106886.4-201ENST00000623557 2502 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 AC006970.2-201ENST00000450065 779 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 AL138781.1-201ENST00000566567 1274 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 AC008403.3-201ENST00000598924 454 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 MTDHP1-201ENST00000605323 784 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 AC131212.4-201ENST00000623606 975 ntBASIC15.88■□□□□ 0.13
SHISA3A0PJX4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms