Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 AC084018.2-201ENST00000613093 2607 ntBASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 MCCD1P1-208ENST00000445732 328 ntBASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 KSR1P1-201ENST00000446298 240 ntBASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 AL121761.2-201ENST00000598007 1648 ntBASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 LINC00602-201ENST00000629776 2065 ntBASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV27A0A0K0K1C4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRBV27A0A0K0K1C4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TRBV27A0A0K0K1C4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRBV27A0A0K0K1C4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 AL163051.1-201ENST00000569214 1512 ntBASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 MIR149-201ENST00000384879 89 ntBASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 KRASP1-201ENST00000407852 552 ntBASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 AC011298.2-201ENST00000617989 482 ntBASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 AL138688.1-201ENST00000624851 1594 ntBASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV27A0A0K0K1C4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 AL023284.2-201ENST00000405850 579 ntBASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 FAM207BP-201ENST00000447172 505 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms