Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FEM1AP3-201ENST00000403722 1741 ntBASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FAM197Y1-201ENST00000421178 764 ntBASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AC083906.6-201ENST00000641366 219 ntBASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC073592.3-201ENST00000625118 1834 ntBASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AC093827.2-201ENST00000512654 315 ntBASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 Z99916.2-201ENST00000604037 246 ntBASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
TRAV8-3A0A0A6YYJ7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms