Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC142381.4-202ENST00000563973 229 ntBASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV5-3A0A0A0MS03 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC133963.1-201ENST00000504166 1679 ntBASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 TSPY20P-201ENST00000450910 630 ntBASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC010240.3-201ENST00000607688 395 ntBASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL023806.1-201ENST00000603994 1649 ntBASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL138688.1-201ENST00000624851 1594 ntBASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV5-3A0A0A0MS03 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 RBM17P1-201ENST00000453646 1190 ntBASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 AP003071.4-201ENST00000562276 1284 ntBASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 LINC00602-201ENST00000629776 2065 ntBASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 AP001094.4-201ENST00000579008 2176 ntBASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-3A0A0A0MS03 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 AC007663.1-201ENST00000438948 1240 ntBASIC17.03■□□□□ 0.32
TRBV5-3A0A0A0MS03 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms