Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ECEL1P2-202ENST00000465689 757 ntBASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ESPNP-201ENST00000270691 2015 ntBASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 KRT18P22-201ENST00000402024 1347 ntBASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDHGA11Q9Y5H2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 SDHAP2-201ENST00000455183 2001 ntBASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 LINC01568-207ENST00000641790 1380 ntBASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 FAM87A-204ENST00000613235 858 ntBASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGA11Q9Y5H2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGA11Q9Y5H2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms