Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGC3Q9UN70 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGC3Q9UN70 NOC2LP2-201ENST00000407594 1944 ntBASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 MIR662-201ENST00000384847 95 ntBASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGC3Q9UN70 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 AC008764.6-201ENST00000595909 2069 ntBASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 KRT18P48-201ENST00000434763 852 ntBASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 LINC01238-205ENST00000567549 1107 ntBASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGC3Q9UN70 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms