Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 BX664615.1-201ENST00000443558 458 ntBASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 COX11P1-201ENST00000489116 835 ntBASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 AC140113.3-201ENST00000605663 199 ntBASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHRNA9Q9UGM1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 AC067852.2-201ENST00000590513 2313 ntBASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 AL023973.1-201ENST00000624619 620 ntBASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHRNA9Q9UGM1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNA9Q9UGM1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CHRNA9Q9UGM1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 KRT18P57-201ENST00000443599 1254 ntBASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CHRNA9Q9UGM1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms