Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE7Q9UBL6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 TSPY12P-201ENST00000421279 868 ntBASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 AC104819.1-201ENST00000504587 486 ntBASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 AC011840.4-201ENST00000578471 627 ntBASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 AL691432.3-201ENST00000621860 400 ntBASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE7Q9UBL6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 LINC00167-201ENST00000530583 1419 ntBASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 AC074051.2-201ENST00000565115 352 ntBASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CPNE7Q9UBL6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.64■□□□□ 0.42
CPNE7Q9UBL6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 KRT17P6-201ENST00000453795 1220 ntBASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 GMCL1P1-201ENST00000463439 1581 ntBASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE7Q9UBL6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AC087289.5-201ENST00000586076 3175 ntBASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 AC018445.3-201ENST00000624177 1945 ntBASIC17.63■□□□□ 0.41
CPNE7Q9UBL6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms