Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
NCDNQ9UBB6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCDNQ9UBB6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCDNQ9UBB6 AP005117.1-201ENST00000584346 1413 ntBASIC18.06■□□□□ 0.48
NCDNQ9UBB6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 AL356309.3-201ENST00000624132 1934 ntBASIC18.06■□□□□ 0.48
NCDNQ9UBB6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 AC005829.1-201ENST00000570002 483 ntBASIC18.06■□□□□ 0.48
NCDNQ9UBB6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.06■□□□□ 0.48
NCDNQ9UBB6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 MIR770-201ENST00000390219 98 ntBASIC18.05■□□□□ 0.48
NCDNQ9UBB6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCDNQ9UBB6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 AC106028.4-201ENST00000614509 607 ntBASIC18.04■□□□□ 0.48
NCDNQ9UBB6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NCDNQ9UBB6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms