Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 AL121912.1-201ENST00000603683 238 ntBASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.61■□□□□ 0.41
LRIT1Q9P2V4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
LRIT1Q9P2V4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 AP002469.2-201ENST00000531724 424 ntBASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
LRIT1Q9P2V4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 BX323043.1-201ENST00000641006 1765 ntBASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRIT1Q9P2V4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 AKR1C7P-201ENST00000305623 895 ntBASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 SAPCD2P3-201ENST00000455031 850 ntBASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 AC068472.1-201ENST00000474589 881 ntBASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 MIR5100-201ENST00000579544 119 ntBASIC17.58■□□□□ 0.4
LRIT1Q9P2V4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms