Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC142381.4-202ENST00000563973 229 ntBASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 AL359736.2-201ENST00000621992 437 ntBASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 SIRPAP1-201ENST00000448467 1770 ntBASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCAL1Q9NZC9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCAL1Q9NZC9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 GPAT2P1-201ENST00000444924 1672 ntBASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 MIR564-202ENST00000385049 94 ntBASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 AL023284.2-201ENST00000405850 579 ntBASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 AL158047.1-201ENST00000445918 881 ntBASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 AC098590.1-201ENST00000468126 897 ntBASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 AP002982.1-201ENST00000492365 877 ntBASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SMARCAL1Q9NZC9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCAL1Q9NZC9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms