Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR3BQ9NW08 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.77■□□□□ 0.59
POLR3BQ9NW08 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
POLR3BQ9NW08 ANO7L1-203ENST00000602586 1720 ntBASIC18.77■□□□□ 0.59
POLR3BQ9NW08 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.77■□□□□ 0.59
POLR3BQ9NW08 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
POLR3BQ9NW08 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 AKR1C7P-201ENST00000305623 895 ntBASIC18.76■□□□□ 0.59
POLR3BQ9NW08 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 TSPY12P-201ENST00000421279 868 ntBASIC18.76■□□□□ 0.59
POLR3BQ9NW08 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 AP005901.3-202ENST00000581653 237 ntBASIC18.76■□□□□ 0.59
POLR3BQ9NW08 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
POLR3BQ9NW08 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 AC023511.2-201ENST00000618803 211 ntBASIC18.75■□□□□ 0.59
POLR3BQ9NW08 AC124864.1-201ENST00000623408 392 ntBASIC18.75■□□□□ 0.59
POLR3BQ9NW08 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 Z98044.1-201ENST00000632503 1764 ntBASIC18.75■□□□□ 0.59
POLR3BQ9NW08 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
POLR3BQ9NW08 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 HOXB1-202ENST00000577092 1414 ntBASIC18.74■□□□□ 0.59
POLR3BQ9NW08 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR3BQ9NW08 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms