Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AP002414.4-201ENST00000589764 1148 ntBASIC18.82■□□□□ 0.6
VPS45Q9NRW7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.82■□□□□ 0.6
VPS45Q9NRW7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS45Q9NRW7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 AC009078.2-202ENST00000463353 338 ntBASIC18.81■□□□□ 0.6
VPS45Q9NRW7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 LINC01711-201ENST00000598340 967 ntBASIC18.81■□□□□ 0.6
VPS45Q9NRW7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS45Q9NRW7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 EMBP1-201ENST00000458200 901 ntBASIC18.8■□□□□ 0.6
VPS45Q9NRW7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 KRT8P26-201ENST00000534154 1276 ntBASIC18.8■□□□□ 0.6
VPS45Q9NRW7 AL160237.2-201ENST00000556165 472 ntBASIC18.8■□□□□ 0.6
VPS45Q9NRW7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS45Q9NRW7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS45Q9NRW7 AC009113.1-201ENST00000570267 2443 ntBASIC18.79■□□□□ 0.6
VPS45Q9NRW7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms