Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 AC003102.1-202ENST00000563394 1796 ntBASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CDC42SE1Q9NRR8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 FES-204ENST00000414248 2327 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 AL671710.1-201ENST00000610245 2349 ntBASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
CDC42SE1Q9NRR8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
CDC42SE1Q9NRR8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
CDC42SE1Q9NRR8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 AC079089.2-201ENST00000531211 1277 ntBASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 GOLGA2P11-201ENST00000562660 1621 ntBASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC9.33□□□□□ -0.92
CDC42SE1Q9NRR8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms