Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 PGAM5P1-201ENST00000518923 814 ntBASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 AC055717.3-201ENST00000622967 595 ntBASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 AC093503.3-201ENST00000624917 2352 ntBASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 AC009102.3-201ENST00000623118 1491 ntBASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.36■□□□□ 0.85
PDLIM7Q9NR12 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 AC132008.2-207ENST00000454517 770 ntBASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 KRT89P-201ENST00000620027 1478 ntBASIC20.35■□□□□ 0.85
PDLIM7Q9NR12 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 AL355385.1-201ENST00000606123 409 ntBASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
PDLIM7Q9NR12 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 HNRNPDP1-201ENST00000439535 754 ntBASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 AL139424.1-201ENST00000607572 797 ntBASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 AL355877.3-201ENST00000622820 899 ntBASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 AC116407.3-201ENST00000623905 1129 ntBASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
PDLIM7Q9NR12 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDLIM7Q9NR12 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM7Q9NR12 AC005082.1-201ENST00000413042 2259 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms