Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 FER1L4-210ENST00000615531 5998 ntBASIC15.6■□□□□ 0.09
GCM1Q9NP62 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.6■□□□□ 0.09
GCM1Q9NP62 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GCM1Q9NP62 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 AC112907.2-201ENST00000448639 330 ntBASIC15.59■□□□□ 0.09
GCM1Q9NP62 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.59■□□□□ 0.09
GCM1Q9NP62 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GCM1Q9NP62 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GCM1Q9NP62 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
GCM1Q9NP62 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
GCM1Q9NP62 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
GCM1Q9NP62 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.58■□□□□ 0.09
GCM1Q9NP62 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.58■□□□□ 0.09
GCM1Q9NP62 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 KRT18P35-201ENST00000510488 1269 ntBASIC15.58■□□□□ 0.08
GCM1Q9NP62 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 AL445228.2-201ENST00000605589 952 ntBASIC15.58■□□□□ 0.08
GCM1Q9NP62 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.58■□□□□ 0.08
GCM1Q9NP62 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
GCM1Q9NP62 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
GCM1Q9NP62 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
GCM1Q9NP62 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GCM1Q9NP62 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms