Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
BRF2Q9HAW0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BRF2Q9HAW0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.46■□□□□ 0.38
BRF2Q9HAW0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
BRF2Q9HAW0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
BRF2Q9HAW0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 AC087499.1-201ENST00000418141 1075 ntBASIC17.45■□□□□ 0.38
BRF2Q9HAW0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.45■□□□□ 0.38
BRF2Q9HAW0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRF2Q9HAW0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 GNAS-203ENST00000306120 1878 ntBASIC17.44■□□□□ 0.38
BRF2Q9HAW0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PVRIG2P-201ENST00000435460 978 ntBASIC17.44■□□□□ 0.38
BRF2Q9HAW0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AC141257.4-201ENST00000634557 245 ntBASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AC136944.6-201ENST00000634818 245 ntBASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 AP000997.3-201ENST00000623333 2250 ntBASIC17.44■□□□□ 0.38
BRF2Q9HAW0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
BRF2Q9HAW0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
BRF2Q9HAW0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms