Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRD9Q9H8M2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 KRT18P13-201ENST00000400056 1290 ntBASIC18.81■□□□□ 0.6
BRD9Q9H8M2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 AC132008.2-207ENST00000454517 770 ntBASIC18.81■□□□□ 0.6
BRD9Q9H8M2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 KRT18P41-201ENST00000518924 1277 ntBASIC18.81■□□□□ 0.6
BRD9Q9H8M2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
BRD9Q9H8M2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.8■□□□□ 0.6
BRD9Q9H8M2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 SLC25A1P1-201ENST00000528351 927 ntBASIC18.8■□□□□ 0.6
BRD9Q9H8M2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRD9Q9H8M2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 AC139530.3-201ENST00000620344 690 ntBASIC18.79■□□□□ 0.6
BRD9Q9H8M2 AC148477.8-201ENST00000624298 468 ntBASIC18.79■□□□□ 0.6
BRD9Q9H8M2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 MTMR9LP-203ENST00000426597 1545 ntBASIC18.79■□□□□ 0.6
BRD9Q9H8M2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRD9Q9H8M2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms