Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 AC093536.1-201ENST00000569153 554 ntBASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 AC011551.1-201ENST00000614101 683 ntBASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CYSTM1Q9H1C7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AC073869.1-201ENST00000415574 2762 ntBASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 RP9P-202ENST00000450133 1212 ntBASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
CYSTM1Q9H1C7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 AC060834.1-201ENST00000443027 2032 ntBASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 AL499627.1-201ENST00000569373 2188 ntBASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CYSTM1Q9H1C7 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms