Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC097374.2-201ENST00000618617 1306 ntBASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 AP005117.1-201ENST00000584346 1413 ntBASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 AC121338.2-201ENST00000622535 1744 ntBASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.35■□□□□ 0.37
CNTNAP3Q9BZ76 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC236430.1-201ENST00000402231 743 ntBASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC024563.2-201ENST00000603282 481 ntBASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AL356309.3-201ENST00000624132 1934 ntBASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.34■□□□□ 0.37
CNTNAP3Q9BZ76 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 AC073314.1-201ENST00000568729 2216 ntBASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CNTNAP3Q9BZ76 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 AFG3L1P-217ENST00000557444 2447 ntBASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNTNAP3Q9BZ76 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNTNAP3Q9BZ76 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 INGX-202ENST00000489074 768 ntBASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.31■□□□□ 0.36
CNTNAP3Q9BZ76 AC104390.1-201ENST00000555663 520 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms