Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AL158211.3-201ENST00000607385 239 ntBASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AC068587.9-201ENST00000641814 219 ntBASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL25A1Q9BXS0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 PMPCAP1-201ENST00000508114 1576 ntBASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 ZNF815P-204ENST00000434898 1737 ntBASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
COL25A1Q9BXS0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
COL25A1Q9BXS0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
COL25A1Q9BXS0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 SPDYE21P-201ENST00000413323 827 ntBASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 RN7SL190P-201ENST00000582519 257 ntBASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 AC009154.2-201ENST00000621177 724 ntBASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 AL357033.4-201ENST00000617703 1807 ntBASIC18.33■□□□□ 0.52
COL25A1Q9BXS0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 KRT8P44-201ENST00000441609 1350 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 MRPS18AP1-201ENST00000414458 589 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC112492.5-201ENST00000421897 457 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC097493.3-201ENST00000509725 367 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 MIR4538-201ENST00000581377 78 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC026120.1-201ENST00000611536 926 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 IGHV3-72-202ENST00000621503 303 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC138969.3-201ENST00000546612 1459 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC138932.2-201ENST00000548268 1459 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 AC126755.4-201ENST00000549796 1459 ntBASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
COL25A1Q9BXS0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
COL25A1Q9BXS0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms