Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCM2Q9BSQ5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 KRT18P48-201ENST00000434763 852 ntBASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 VENTXP5-201ENST00000523979 775 ntBASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 KRT89P-201ENST00000620027 1478 ntBASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCM2Q9BSQ5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 AC007613.1-201ENST00000572811 2597 ntBASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 SPDYE13P-201ENST00000445314 798 ntBASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 FAM86EP-206ENST00000510506 987 ntBASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCM2Q9BSQ5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 BCL2-203ENST00000589955 5011 ntBASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.92■□□□□ 0.46
CCM2Q9BSQ5 AC091076.1-201ENST00000610741 619 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms