Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.75■□□□□ 0.91
ARID3AQ99856 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ARID3AQ99856 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ARID3AQ99856 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ARID3AQ99856 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ARID3AQ99856 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 AC135776.1-201ENST00000319817 2481 ntBASIC20.74■□□□□ 0.91
ARID3AQ99856 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ARID3AQ99856 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.74■□□□□ 0.91
ARID3AQ99856 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.74■□□□□ 0.91
ARID3AQ99856 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.74■□□□□ 0.91
ARID3AQ99856 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 AL596257.1-201ENST00000641463 2694 ntBASIC20.74■□□□□ 0.91
ARID3AQ99856 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARID3AQ99856 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ARID3AQ99856 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.73■□□□□ 0.91
ARID3AQ99856 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.73■□□□□ 0.91
ARID3AQ99856 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.73■□□□□ 0.91
ARID3AQ99856 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.73■□□□□ 0.91
ARID3AQ99856 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.73■□□□□ 0.91
ARID3AQ99856 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARID3AQ99856 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARID3AQ99856 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ARID3AQ99856 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.72■□□□□ 0.91
ARID3AQ99856 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.72■□□□□ 0.91
ARID3AQ99856 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.72■□□□□ 0.91
ARID3AQ99856 UBALD1-205ENST00000590891 2641 ntBASIC20.72■□□□□ 0.91
ARID3AQ99856 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.72■□□□□ 0.91
ARID3AQ99856 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ARID3AQ99856 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.72■□□□□ 0.91
ARID3AQ99856 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.72■□□□□ 0.91
ARID3AQ99856 TEX21P-204ENST00000641479 1693 ntBASIC20.72■□□□□ 0.91
ARID3AQ99856 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ARID3AQ99856 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ARID3AQ99856 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
ARID3AQ99856 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
ARID3AQ99856 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARID3AQ99856 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ARID3AQ99856 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ARID3AQ99856 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms