Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPAS2Q99743 AC106820.2-201ENST00000563775 3264 ntBASIC17.89■□□□□ 0.45
NPAS2Q99743 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
NPAS2Q99743 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.88■□□□□ 0.45
NPAS2Q99743 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.88■□□□□ 0.45
NPAS2Q99743 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC004951.3-201ENST00000418645 1148 ntBASIC17.88■□□□□ 0.45
NPAS2Q99743 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC097488.1-201ENST00000507834 756 ntBASIC17.88■□□□□ 0.45
NPAS2Q99743 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.88■□□□□ 0.45
NPAS2Q99743 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.88■□□□□ 0.45
NPAS2Q99743 NAPSB-206ENST00000562112 1266 ntBASIC17.88■□□□□ 0.45
NPAS2Q99743 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.88■□□□□ 0.45
NPAS2Q99743 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 LINC01568-207ENST00000641790 1380 ntBASIC17.88■□□□□ 0.45
NPAS2Q99743 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.88■□□□□ 0.45
NPAS2Q99743 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NPAS2Q99743 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPAS2Q99743 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS2Q99743 AC099398.1-201ENST00000567919 2776 ntBASIC17.87■□□□□ 0.45
NPAS2Q99743 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NPAS2Q99743 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPAS2Q99743 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.87■□□□□ 0.45
NPAS2Q99743 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.87■□□□□ 0.45
NPAS2Q99743 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.87■□□□□ 0.45
NPAS2Q99743 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.87■□□□□ 0.45
NPAS2Q99743 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.87■□□□□ 0.45
NPAS2Q99743 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
NPAS2Q99743 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NPAS2Q99743 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPAS2Q99743 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.86■□□□□ 0.45
NPAS2Q99743 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 CRYGFP-201ENST00000418459 633 ntBASIC17.86■□□□□ 0.45
NPAS2Q99743 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.86■□□□□ 0.45
NPAS2Q99743 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
NPAS2Q99743 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
NPAS2Q99743 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.86■□□□□ 0.45
NPAS2Q99743 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.86■□□□□ 0.45
NPAS2Q99743 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 AL357033.4-201ENST00000617703 1807 ntBASIC17.86■□□□□ 0.45
NPAS2Q99743 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NPAS2Q99743 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms