Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB40CQ96S21 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB40CQ96S21 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB40CQ96S21 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB40CQ96S21 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 PHGDH-209ENST00000641074 1780 ntBASIC14.81□□□□□ -0.04
RAB40CQ96S21 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 AC124067.4-201ENST00000519691 2379 ntBASIC14.81□□□□□ -0.04
RAB40CQ96S21 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 AC083880.1-201ENST00000608266 535 ntBASIC14.81□□□□□ -0.04
RAB40CQ96S21 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.81□□□□□ -0.04
RAB40CQ96S21 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB40CQ96S21 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB40CQ96S21 AC080080.1-201ENST00000625121 2420 ntBASIC14.81□□□□□ -0.04
RAB40CQ96S21 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 KRT18P55-202ENST00000578578 1546 ntBASIC14.8□□□□□ -0.04
RAB40CQ96S21 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB40CQ96S21 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB40CQ96S21 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms