Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 MBP-227ENST00000526111 581 ntTSL 4 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 AC096734.2-201ENST00000562054 433 ntBASIC5.52□□□□□ -1.53
HMCN1Q96RW7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMCN1Q96RW7 AC244015.2-201ENST00000616358 1861 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC009407.1-201ENST00000568958 598 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC099343.3-201ENST00000605834 2503 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC008735.3-201ENST00000596646 500 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC091046.1-201ENST00000331871 207 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 RN7SL752P-201ENST00000463779 287 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC025580.3-201ENST00000617932 1424 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC068472.1-201ENST00000474589 881 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AL512343.1-201ENST00000605837 169 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC099522.2-201ENST00000607001 744 ntBASIC5.51□□□□□ -1.53
HMCN1Q96RW7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC5.51□□□□□ -1.53
HMCN1Q96RW7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms