Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 AC087499.1-201ENST00000418141 1075 ntBASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.32■□□□□ 0.36
BBS4Q96RK4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BBS4Q96RK4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AC093677.2-201ENST00000600169 1863 ntBASIC17.31■□□□□ 0.36
BBS4Q96RK4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AC024243.1-201ENST00000609234 778 ntBASIC17.31■□□□□ 0.36
BBS4Q96RK4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BBS4Q96RK4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.31■□□□□ 0.36
BBS4Q96RK4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.3■□□□□ 0.36
BBS4Q96RK4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.3■□□□□ 0.36
BBS4Q96RK4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.3■□□□□ 0.36
BBS4Q96RK4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 SDHAP2-201ENST00000455183 2001 ntBASIC17.3■□□□□ 0.36
BBS4Q96RK4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
BBS4Q96RK4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.29■□□□□ 0.36
BBS4Q96RK4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BBS4Q96RK4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
BBS4Q96RK4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
BBS4Q96RK4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
BBS4Q96RK4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.29■□□□□ 0.36
BBS4Q96RK4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms