Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 AC005829.1-201ENST00000570002 483 ntBASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 AL138831.2-201ENST00000606564 490 ntBASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CSMD1Q96PZ7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 AL008721.1-201ENST00000609964 604 ntBASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 AL513190.1-201ENST00000621254 727 ntBASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD1Q96PZ7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 AP002414.3-201ENST00000589352 1468 ntBASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.46■□□□□ 0.07
CSMD1Q96PZ7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CSMD1Q96PZ7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.46■□□□□ 0.06
CSMD1Q96PZ7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CSMD1Q96PZ7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.46■□□□□ 0.06
CSMD1Q96PZ7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.46■□□□□ 0.06
CSMD1Q96PZ7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC104390.1-201ENST00000555663 520 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC006333.2-201ENST00000607957 2099 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 AC002472.2-201ENST00000442739 958 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 PDPK2P-202ENST00000562415 1191 ntBASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD1Q96PZ7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms