Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PGBD1Q96JS3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PGBD1Q96JS3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PGBD1Q96JS3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PGBD1Q96JS3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 ARMC10P1-201ENST00000313754 855 ntBASIC21.21■□□□□ 0.99
PGBD1Q96JS3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.21■□□□□ 0.99
PGBD1Q96JS3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 MYC-208ENST00000641036 567 ntBASIC21.21■□□□□ 0.99
PGBD1Q96JS3 MYLKP1-201ENST00000509077 1580 ntBASIC21.21■□□□□ 0.99
PGBD1Q96JS3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PGBD1Q96JS3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PGBD1Q96JS3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.2■□□□□ 0.99
PGBD1Q96JS3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PGBD1Q96JS3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 KRT8P50-201ENST00000562022 1438 ntBASIC21.2■□□□□ 0.98
PGBD1Q96JS3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PGBD1Q96JS3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AC112907.2-201ENST00000448639 330 ntBASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AC092597.1-201ENST00000487352 616 ntBASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AC087388.1-201ENST00000571370 1112 ntBASIC21.19■□□□□ 0.98
PGBD1Q96JS3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 LTB4R2-202ENST00000528054 3092 ntBASIC21.19■□□□□ 0.98
PGBD1Q96JS3 HOXB1-202ENST00000577092 1414 ntBASIC21.19■□□□□ 0.98
PGBD1Q96JS3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PGBD1Q96JS3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.18■□□□□ 0.98
PGBD1Q96JS3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 RASA4DP-201ENST00000460726 1199 ntBASIC21.18■□□□□ 0.98
PGBD1Q96JS3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.18■□□□□ 0.98
PGBD1Q96JS3 KRT18P41-201ENST00000518924 1277 ntBASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms