Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 NKAPP1-205ENST00000585790 367 ntBASIC15.43■□□□□ 0.06
SPG11Q96JI7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 KRT18P28-201ENST00000453838 1332 ntBASIC15.43■□□□□ 0.06
SPG11Q96JI7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 RPS2P28-201ENST00000314255 741 ntBASIC15.43■□□□□ 0.06
SPG11Q96JI7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.43■□□□□ 0.06
SPG11Q96JI7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SPG11Q96JI7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 AL032819.2-201ENST00000624543 2162 ntBASIC15.42■□□□□ 0.06
SPG11Q96JI7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 AC002310.6-201ENST00000624451 1377 ntBASIC15.42■□□□□ 0.06
SPG11Q96JI7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SPG11Q96JI7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SPG11Q96JI7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.41■□□□□ 0.06
SPG11Q96JI7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.41■□□□□ 0.06
SPG11Q96JI7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SPG11Q96JI7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms