Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 AL022342.1-201ENST00000400363 863 ntBASIC18.27■□□□□ 0.52
SIPA1Q96FS4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SIPA1Q96FS4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SIPA1Q96FS4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 AC068472.1-201ENST00000474589 881 ntBASIC18.26■□□□□ 0.51
SIPA1Q96FS4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 AC064862.7-201ENST00000604520 867 ntBASIC18.26■□□□□ 0.51
SIPA1Q96FS4 AC114341.1-201ENST00000618070 349 ntBASIC18.26■□□□□ 0.51
SIPA1Q96FS4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SIPA1Q96FS4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 AC116562.4-201ENST00000641316 2276 ntBASIC18.25■□□□□ 0.51
SIPA1Q96FS4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SIPA1Q96FS4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 AL499627.1-201ENST00000569373 2188 ntBASIC18.24■□□□□ 0.51
SIPA1Q96FS4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SIPA1Q96FS4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms