Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 RPS2P1-201ENST00000434010 821 ntBASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 SART3-203ENST00000546611 1184 ntBASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP40Q96DI7 HLA-J-201ENST00000462773 1622 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 MTCL1P1-201ENST00000446207 792 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AC011467.2-201ENST00000598425 242 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AL356488.2-201ENST00000602755 427 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AC140113.2-201ENST00000604370 208 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AL138831.2-201ENST00000606564 490 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 FAM197Y3-203ENST00000618346 717 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 AC055717.3-201ENST00000622967 595 ntBASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.37■□□□□ 0.21
SNRNP40Q96DI7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 MED15P5-201ENST00000423150 992 ntBASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 ABCD1P5-201ENST00000445663 754 ntBASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 AC092910.1-201ENST00000482027 1129 ntBASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 AC009154.2-201ENST00000621177 724 ntBASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SNRNP40Q96DI7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms