Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AC008550.1-201ENST00000511500 884 ntBASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AC093827.2-201ENST00000512654 315 ntBASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AC066615.1-201ENST00000640911 628 ntBASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.9■□□□□ 0.14
FOXRED1Q96CU9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 AC026271.3-201ENST00000571884 352 ntBASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FOXRED1Q96CU9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 AL096828.2-201ENST00000567259 1965 ntBASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 MIR564-202ENST00000385049 94 ntBASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 AC011298.2-201ENST00000617989 482 ntBASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 AL031985.4-201ENST00000642138 673 ntBASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
FOXRED1Q96CU9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
FOXRED1Q96CU9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms