Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 SNORA78-201ENST00000459373 127 ntBASIC19.21■□□□□ 0.67
RNF25Q96BH1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 MIR4785-201ENST00000585005 73 ntBASIC19.21■□□□□ 0.67
RNF25Q96BH1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 LINC00896-202ENST00000609602 2128 ntBASIC19.21■□□□□ 0.67
RNF25Q96BH1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF25Q96BH1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF25Q96BH1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.66
RNF25Q96BH1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 MIR1238-201ENST00000408483 83 ntBASIC19.2■□□□□ 0.66
RNF25Q96BH1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 AL353719.1-201ENST00000566847 864 ntBASIC19.2■□□□□ 0.66
RNF25Q96BH1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF25Q96BH1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF25Q96BH1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF25Q96BH1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.19■□□□□ 0.66
RNF25Q96BH1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RNF25Q96BH1 FITM1-202ENST00000559294 800 ntBASIC19.19■□□□□ 0.66
RNF25Q96BH1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF25Q96BH1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF25Q96BH1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF25Q96BH1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF25Q96BH1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF25Q96BH1 AC134043.2-201ENST00000624206 2238 ntBASIC19.19■□□□□ 0.66
RNF25Q96BH1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 TSPY17P-201ENST00000450329 467 ntBASIC19.18■□□□□ 0.66
RNF25Q96BH1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 AC006518.1-201ENST00000541449 943 ntBASIC19.18■□□□□ 0.66
RNF25Q96BH1 AL355075.4-201ENST00000554988 638 ntBASIC19.18■□□□□ 0.66
RNF25Q96BH1 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 CR769767.2-201ENST00000622735 460 ntBASIC19.18■□□□□ 0.66
RNF25Q96BH1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF25Q96BH1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF25Q96BH1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF25Q96BH1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms