Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZNF428Q96B54 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.42■■□□□ 1.34
ZNF428Q96B54 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.42■■□□□ 1.34
ZNF428Q96B54 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ZNF428Q96B54 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
ZNF428Q96B54 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 HES2-202ENST00000377836 507 ntTSL 2 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 AP002414.4-201ENST00000589764 1148 ntBASIC23.41■■□□□ 1.34
ZNF428Q96B54 AC092329.2-201ENST00000598402 547 ntBASIC23.41■■□□□ 1.34
ZNF428Q96B54 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.41■■□□□ 1.34
ZNF428Q96B54 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 AL096828.2-201ENST00000567259 1965 ntBASIC23.41■■□□□ 1.34
ZNF428Q96B54 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.41■■□□□ 1.34
ZNF428Q96B54 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
ZNF428Q96B54 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ZNF428Q96B54 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZNF428Q96B54 BX276092.5-203ENST00000456199 560 ntBASIC23.4■■□□□ 1.34
ZNF428Q96B54 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZNF428Q96B54 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZNF428Q96B54 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
ZNF428Q96B54 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.39■■□□□ 1.34
ZNF428Q96B54 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZNF428Q96B54 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZNF428Q96B54 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZNF428Q96B54 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
ZNF428Q96B54 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZNF428Q96B54 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
ZNF428Q96B54 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.39■■□□□ 1.33
ZNF428Q96B54 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.39■■□□□ 1.33
ZNF428Q96B54 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.39■■□□□ 1.33
ZNF428Q96B54 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.39■■□□□ 1.33
ZNF428Q96B54 DUTP2-201ENST00000519164 463 ntBASIC23.39■■□□□ 1.33
ZNF428Q96B54 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 AL390961.4-201ENST00000623958 2535 ntBASIC23.39■■□□□ 1.33
ZNF428Q96B54 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.39■■□□□ 1.33
ZNF428Q96B54 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZNF428Q96B54 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 TSPY22P-201ENST00000427496 604 ntBASIC23.38■■□□□ 1.33
ZNF428Q96B54 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.38■■□□□ 1.33
ZNF428Q96B54 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZNF428Q96B54 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms