Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9Q92623 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TTC9Q92623 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9Q92623 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC9Q92623 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.36■□□□□ 0.37
TTC9Q92623 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9Q92623 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.36■□□□□ 0.37
TTC9Q92623 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TTC9Q92623 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TTC9Q92623 Z83836.1-201ENST00000624605 1642 ntBASIC17.36■□□□□ 0.37
TTC9Q92623 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.36■□□□□ 0.37
TTC9Q92623 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TTC9Q92623 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC9Q92623 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.35■□□□□ 0.37
TTC9Q92623 IGHV3-47-201ENST00000425060 335 ntBASIC17.35■□□□□ 0.37
TTC9Q92623 HMGN1P19-201ENST00000436976 333 ntBASIC17.35■□□□□ 0.37
TTC9Q92623 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 POLD2P1-201ENST00000511220 997 ntBASIC17.35■□□□□ 0.37
TTC9Q92623 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TTC9Q92623 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.35■□□□□ 0.37
TTC9Q92623 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.35■□□□□ 0.37
TTC9Q92623 AC106730.1-201ENST00000566722 1090 ntBASIC17.35■□□□□ 0.37
TTC9Q92623 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.35■□□□□ 0.37
TTC9Q92623 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC9Q92623 Z69720.1-201ENST00000601483 472 ntBASIC17.35■□□□□ 0.37
TTC9Q92623 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TTC9Q92623 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TTC9Q92623 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
TTC9Q92623 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TTC9Q92623 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TTC9Q92623 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TTC9Q92623 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.34■□□□□ 0.37
TTC9Q92623 AL023284.2-201ENST00000405850 579 ntBASIC17.34■□□□□ 0.37
TTC9Q92623 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 BX842568.4-201ENST00000421222 227 ntBASIC17.34■□□□□ 0.37
TTC9Q92623 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.34■□□□□ 0.37
TTC9Q92623 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.34■□□□□ 0.37
TTC9Q92623 PMS2P7-201ENST00000506558 1336 ntBASIC17.34■□□□□ 0.37
TTC9Q92623 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 AL161938.1-201ENST00000569833 2180 ntBASIC17.34■□□□□ 0.37
TTC9Q92623 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.34■□□□□ 0.37
TTC9Q92623 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.34■□□□□ 0.37
TTC9Q92623 AC093503.3-201ENST00000624917 2352 ntBASIC17.34■□□□□ 0.37
TTC9Q92623 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.34■□□□□ 0.37
TTC9Q92623 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TTC9Q92623 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TTC9Q92623 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TTC9Q92623 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.34■□□□□ 0.37
TTC9Q92623 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
TTC9Q92623 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
TTC9Q92623 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TTC9Q92623 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TTC9Q92623 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
TTC9Q92623 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.33■□□□□ 0.37
TTC9Q92623 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TTC9Q92623 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
TTC9Q92623 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TTC9Q92623 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.33■□□□□ 0.36
TTC9Q92623 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.33■□□□□ 0.36
TTC9Q92623 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9Q92623 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TTC9Q92623 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms