Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TM9SF4Q92544 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.24■□□□□ 0.35
TM9SF4Q92544 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.24■□□□□ 0.35
TM9SF4Q92544 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.24■□□□□ 0.35
TM9SF4Q92544 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.24■□□□□ 0.35
TM9SF4Q92544 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TM9SF4Q92544 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 NOC2LP1-202ENST00000452600 2235 ntBASIC17.23■□□□□ 0.35
TM9SF4Q92544 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.23■□□□□ 0.35
TM9SF4Q92544 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.23■□□□□ 0.35
TM9SF4Q92544 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TM9SF4Q92544 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 KRT8P26-201ENST00000534154 1276 ntBASIC17.22■□□□□ 0.35
TM9SF4Q92544 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 AC111152.3-201ENST00000569699 673 ntBASIC17.22■□□□□ 0.35
TM9SF4Q92544 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TM9SF4Q92544 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 AL512353.2-201ENST00000448759 1962 ntBASIC17.22■□□□□ 0.35
TM9SF4Q92544 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TM9SF4Q92544 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms