Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 AL355312.1-201ENST00000407115 2176 ntBASIC14.33□□□□□ -0.11
MBD3L1Q8WWY6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 POU5F1P3-201ENST00000428824 1078 ntBASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 AC093787.1-201ENST00000450396 207 ntBASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 AC131212.1-201ENST00000613771 668 ntBASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 HLA-A-209ENST00000638375 975 ntBASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 AC133963.1-201ENST00000504166 1679 ntBASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.33□□□□□ -0.12
MBD3L1Q8WWY6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 UBALD1-205ENST00000590891 2641 ntBASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
MBD3L1Q8WWY6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L1Q8WWY6 AP000593.1-201ENST00000393668 712 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms