Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 AL390955.1-201ENST00000428694 934 ntBASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 C2orf69P3-201ENST00000565542 1120 ntBASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 AC073912.3-201ENST00000624414 853 ntBASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 AC099398.1-201ENST00000567919 2776 ntBASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCHCR1Q8TD31 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCHCR1Q8TD31 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 NAPSB-206ENST00000562112 1266 ntBASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCHCR1Q8TD31 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CCHCR1Q8TD31 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCHCR1Q8TD31 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCHCR1Q8TD31 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.02■□□□□ 0.63
CCHCR1Q8TD31 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CCHCR1Q8TD31 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCHCR1Q8TD31 AC009053.2-201ENST00000563701 2365 ntBASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CCHCR1Q8TD31 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms